sample_id	patient_id	label	condition	subtype	batch_id	flowcell	input_records	canonical_autosome_usable_coordinate_records	global_short_long_log_ratio	coverage_logratio_mad	median_fragment_length	posthoc_advanced_disease_batch_confounded_grouped_sample_margin	posthoc_advanced_disease_batch_only_grouped_sample_margin
CRPC_248	01115_248	1	prostate_cancer	Prostate	0	H2MHNADXX151023	1485206	1313466	-0.15991882073335079	0.08382311004997511	154.0	2.631615894009586	0.20798221965433716
CRPC_264_7	01115_264	1	prostate_cancer	Prostate	18	H7LNNADXY160722	1663017	1477118	-0.7106742304014764	0.08543204049200614	159.0	1.3034860936236292	0.2831137538224508
CRPC_372_4	01115_372	1	prostate_cancer	Prostate	10	H2V35ADXY160309	3363849	2981455	-0.8434050892566279	0.12767607516516577	166.0	0.7868535272512726	-0.24990893612667817
CRPC_372_11	01115_372	1	prostate_cancer	Prostate	14	H335TADXY160529	2140460	1903184	-0.8586648593268641	0.13807298961321468	166.0	0.8433348558636101	0.22411074030533776
CRPC_372_12	01115_372	1	prostate_cancer	Prostate	16	H3NHGADXY160629	2401473	2129379	-0.5737043414261852	0.15902887936482024	163.0	1.6668392830261967	0.14415520833483306
CRPC_372_13	01115_372	1	prostate_cancer	Prostate	19	H7LTVADXY160813	2276147	2013813	-0.5043243743629341	0.20764818121561035	162.0	2.2159041336984022	0.22411074030533776
CRPC_372_8	01115_372	1	prostate_cancer	Prostate	20	HVTHFBCXX160909	3546565	3130654	-0.5040579181785889	0.2138772303797687	160.0	2.448796208409078	0.22411074030533776
CRPC_463.ctDNA	01115_463	1	prostate_cancer	Prostate	4	H5KNFADXX151207	2096212	1833824	-1.2353399425975455	0.0632146306976944	166.0	-0.29113686166485203	0.20798221965433716
CRPC_468.ctDNA	01115_468	1	prostate_cancer	Prostate	6	H5LFMADXX160116	2309384	2058010	-1.187469041062523	0.06228779360529302	165.0	-0.03983506788717178	0.20158610112247508
CRPC_468.ctDNA_T2	01115_468	1	prostate_cancer	Prostate	6	H5LFMADXX160116	3805030	3348024	-1.195357392193272	0.147871466588259	166.0	0.4311648111592355	0.20158610112247508
CRPC_468_1	01115_468	1	prostate_cancer	Prostate	8	H2HMLADXY160130	1375609	1192871	-1.1514725272790927	0.07100387352506399	165.0	0.07225670779359605	0.023467227541992985
CRPC_468_2	01115_468	1	prostate_cancer	Prostate	12	H2W3CADXY160421	866348	617783	0.570128270625004	0.08908765141189257	138.0	5.811432536846921	0.2767816020296247
CRPC_525_6	01115_525	1	prostate_cancer	Prostate	15	H335TADXY160529	2457395	2156833	-0.8655870232027021	0.16935853114639077	168.0	0.8198476435765163	0.15238928331463236
CRPC_525_5	01115_525	1	prostate_cancer	Prostate	18	H7LNNADXY160722	830872	707189	-1.1099843860795893	0.15028220304933804	167.0	0.44475922256963507	0.28046658916589795
CRPC_531	01115_531	1	prostate_cancer	Prostate	11	H5KNFADXX151207	2234466	1991435	-1.1733544122237363	0.05753859330475031	167.0	-0.3799310960162309	0.151868082227555
CRPC_531_1	01115_531	1	prostate_cancer	Prostate	1	H5KNFADXX151207	3692291	3302493	-1.371292091754369	0.049880384997557314	169.0	-0.9016261750863384	0.23089160615908114
CRPC_1030_10	01115_557	1	prostate_cancer	Prostate	1	H5KNFADXX151207	2569226	2257845	-1.4392336367595446	0.06546839989767239	169.0	-0.899601043514796	0.188828854127337
CRPC_1030_6	01115_557	1	prostate_cancer	Prostate	1	H5KNFADXX151207	2291889	2018095	-0.9196411781677007	0.06664691029235037	168.0	-0.16969897066341255	0.188828854127337
CRPC_1030_3	01115_557	1	prostate_cancer	Prostate	2	H5KNFADXX151207	2474094	2171556	-1.2322645743909415	0.08751435473544333	168.0	-0.3748712411365618	0.133654655118744
CRPC_1030_13	01115_557	1	prostate_cancer	Prostate	2	H5KNFADXX151207	1682989	1479143	-1.4762912999342677	0.07980772870307362	168.0	-0.7379017439946506	0.133654655118744
CRPC_1030	01115_557	1	prostate_cancer	Prostate	6	H5LFMADXX160116	2963270	2607490	-1.2350784270723953	0.07101146446986117	166.0	-0.34644381065835894	0.188828854127337
CRPC_1030_5	01115_557	1	prostate_cancer	Prostate	6	H5LFMADXX160116	3196922	2815582	-1.271155694109605	0.06629910225670965	166.0	-0.43032415579756367	0.188828854127337
CRPC_1030_1	01115_557	1	prostate_cancer	Prostate	12	H2W3CADXY160421	3654813	3205131	-1.038680177673199	0.08335362428863036	168.0	-0.17375058783040576	0.2658079579974666
CRPC_1030_9	01115_557	1	prostate_cancer	Prostate	14	H335TADXY160529	2416060	2121834	-0.5256882381712509	0.1182311647250529	163.0	1.175801378186176	0.21522334318942055
CRPC_1030_2	01115_557	1	prostate_cancer	Prostate	18	H7LNNADXY160722	1480270	1293719	-0.9537995097129275	0.06916335993677247	165.0	0.06697059577366571	0.2658079579974666
CRPC_1030_11	01115_557	1	prostate_cancer	Prostate	19	H7LTVADXY160813	3812509	3339248	-0.8342170015793917	0.06200084862805966	164.0	0.23807715266352975	0.21522334318942055
CRPC_1035_1	01115_606	1	prostate_cancer	Prostate	14	H335TADXY160529	2494585	2187987	-1.144501154482669	0.13867594293802998	167.0	0.31790477134631645	0.23373621353386026
CRPC_1037_2	01115_661	1	prostate_cancer	Prostate	20	HVTHFBCXX160909	982808	866058	-1.1280704764602587	0.13021282710212745	168.0	0.17964707106509858	0.23373621353386026
MBC_1216_2	09204_1054	1	breast_cancer	HER2+	22	H2H7LADXY160205	2782137	2435256	-0.8675458025861538	0.11040855192960564	163.0	0.8788803094321824	0.1518680822275549
MBC_1216_1	09204_1054	1	breast_cancer	HER2+	14	H335TADXY160529	2815493	2481015	-0.8396850292724177	0.13189107621168006	161.0	1.2654237207897543	0.23089160615908105
MBC_1217_2	09204_1056	1	breast_cancer	HER2+	12	H2W3CADXY160421	3425331	2992337	-0.6881335077651951	0.06420326260438713	160.0	1.0666547006773663	0.2831137538224509
MBC_1226	09204_1071	1	breast_cancer	HER2+	9	H2H7LADXY160205	1576469	1365698	-1.4768969965487964	0.042808878446559895	166.0	-0.8084507291638054	0.18147184087681553
MBC_1266	09204_189	1	breast_cancer	TNBC	19	H7LTVADXY160813	1785914	1497283	-0.5882557420123163	0.23280346577762767	162.0	2.3353294692793978	0.23373621353386026
MBC_1296_3	09204_429	1	breast_cancer	TNBC	5	H5LH2ADXX151213	2066263	1781151	0.2832535392391655	0.2898945148069343	148.0	5.649983522166727	0.23373621353386026
MBC_1308_4	09204_557	1	breast_cancer	TNBC	5	H5LH2ADXX151213	2075469	1834350	-0.005231493501622539	0.2018513331435665	154.0	3.7718350572456156	0.23373621353386026
MBC_1321	09204_622	1	breast_cancer	TNBC	20	HVTHFBCXX160909	2062611	1840951	-0.9632186703928763	0.19995178817022463	166.0	1.1356172645943374	0.23373621353386026
MBC_1333_2	09204_732	1	breast_cancer	HER2+	9	H2H7LADXY160205	4180290	3683521	-1.244355307853471	0.08227506066466894	164.0	0.037445782291169516	0.18147184087681553
MBC_1352_2	09204_826	1	breast_cancer	HER2+	13	H2LMNADXY160515	2317243	2029775	-0.8059139947842267	0.158352242359296	161.0	1.529490716556119	0.20798221965433714
MBC_1401_1	09204_997	1	breast_cancer	HER2+	5	H5LH2ADXX151213	1159936	1007214	-1.6492808837269035	0.09623074930945119	170.0	-1.0246268403055767	0.23373621353386026
MBC_12024_17	12024_17	1	breast_cancer	TNBC	18	H7LNNADXY160722	2262006	1991740	-0.5550191731123187	0.18048578286737627	162.0	1.9614974454264675	0.28311375382245085
MBC_1410_1	12431_24	1	breast_cancer	TNBC	8	H2HMLADXY160130	3482219	3071568	-0.22412966428463366	0.1987709988422104	157.0	3.0962866509516425	0.023524668108079988
MBC_1413_2	12431_27	1	breast_cancer	TNBC	3	H5LH2ADXX151213	3497469	3064938	-0.891143281477408	0.1778869597260888	164.0	1.1285294016437453	0.13342884488456708
MBC_1413_6	12431_27	1	breast_cancer	TNBC	3	H5LH2ADXX151213	3275860	2876591	-1.231723984715632	0.11391613351422958	166.0	0.05168020516716765	0.13342884488456708
MBC_1413_3	12431_27	1	breast_cancer	TNBC	3	H5LH2ADXX151213	2196649	1930597	-1.228294894220036	0.1483801801490081	167.0	0.2198836271668477	0.13342884488456708
MBC_1413_8	12431_27	1	breast_cancer	TNBC	3	H5LH2ADXX151213	3961890	3487030	-1.4797512918386035	0.19525729641549638	167.0	0.22355347721517715	0.13342884488456708
MBC_1413_4	12431_27	1	breast_cancer	TNBC	7	H5LFMADXX160116	3634910	3169845	-0.7985557738537841	0.11233349064322518	162.0	0.9479062691288227	0.13342884488456708
MBC_1413_7	12431_27	1	breast_cancer	TNBC	7	H5LFMADXX160116	2426317	2122610	-1.2219464938962827	0.062139505267949424	166.0	-0.30689406758097376	0.13342884488456708
MBC_1413_5	12431_27	1	breast_cancer	TNBC	7	H5LFMADXX160116	2413085	2112803	-1.423770628339714	0.05810652924730686	167.0	-0.6864732000295768	0.13342884488456708
MBC_1413_9	12431_27	1	breast_cancer	TNBC	7	H5LFMADXX160116	3041234	2660891	-1.237764178827088	0.07050330641705838	167.0	-0.3514305362112932	0.13342884488456708
MBC_1413_1	12431_27	1	breast_cancer	TNBC	7	H5LFMADXX160116	2651492	2318824	-1.0172163318394374	0.09924868645819274	164.0	0.3974813605497174	0.13342884488456708
CRPC_1431_1	13449_44	1	prostate_cancer	Prostate	13	H2LMNADXY160515	2280226	2020651	-0.5971854104286575	0.12619382356094366	165.0	1.190480451233264	0.20798221965433714
CRPC_1447_2	14230_1	1	prostate_cancer	Prostate	4	H5KNFADXX151207	2120690	1879701	-0.8658906344473168	0.1772582548374082	165.0	1.1523227978251485	0.19932544501258467
CRPC_1447_5	14230_1	1	prostate_cancer	Prostate	12	H2W3CADXY160421	3288099	2885405	-0.593018207555558	0.17934245087527323	161.0	1.9082833646533186	0.27480528579756
CRPC_1447_1	14230_1	1	prostate_cancer	Prostate	0	H2MHNADXX151023	1666506	1484859	-1.1242220305888988	0.18856531861073034	168.0	0.6032014640695982	0.17270168611183795
CRPC_1447	14230_1	1	prostate_cancer	Prostate	0	H2MHNADXX151023	2048736	1825423	-0.926809513631288	0.16525480145937088	168.0	0.7043789902749766	0.17270168611183795
CRPC_1447_6	14230_1	1	prostate_cancer	Prostate	5	H5LH2ADXX151213	3070924	2761423	-0.9556005262217568	0.1775798126474779	165.0	1.0350181301225914	0.2251946568820371
CRPC_1451_6	14230_14	1	prostate_cancer	Prostate	4	H5KNFADXX151207	3142707	2799603	-1.729546810726791	0.054153958840708505	172.0	-1.5913671352285483	0.1999034036890874
CRPC_1451_9	14230_14	1	prostate_cancer	Prostate	12	H2W3CADXY160421	2230010	1956506	-0.9942801456067862	0.1612077715242073	168.0	0.5753683581517277	0.27535961904306067
CRPC_1451_11	14230_14	1	prostate_cancer	Prostate	13	H2LMNADXY160515	2083175	1813866	-0.8103286056767639	0.21112804494197412	165.0	1.4767858617466971	0.1999034036890874
CRPC_1451_10	14230_14	1	prostate_cancer	Prostate	19	H7LTVADXY160813	1391653	1222044	-0.9554407190581982	0.13955284254914435	165.0	0.7581887805120426	0.22576447150379939
CRPC_1451_4	14230_14	1	prostate_cancer	Prostate	20	HVTHFBCXX160909	2019694	1763528	-0.8906685413807363	0.16285025123787822	165.0	1.0160946236145303	0.22576447150379939
CRPC_1456_2	14230_20	1	prostate_cancer	Prostate	12	H2W3CADXY160421	2443116	2142374	-1.0657442174325502	0.24195135744984064	165.0	1.428030607921167	0.2831137538224509
CRPC_1472_1	BCTC_28	1	prostate_cancer	Prostate	1	H5KNFADXX151207	2882397	2587044	-1.2803965232573533	0.10177891302691489	167.0	-0.14908908636672885	0.23373621353386015
CRPC_1487	GC1609_972	1	prostate_cancer	Prostate	18	H7LNNADXY160722	1771617	1586203	-1.0539258657876875	0.1230543812293643	165.0	0.5231644802297593	0.28311375382245085
CRPC_1488	GC1609_985	1	prostate_cancer	Prostate	18	H7LNNADXY160722	1405815	1259344	-1.1536647080078035	0.16363961985223696	166.0	0.5878580830921383	0.28311375382245085
HD_38	HD_38	0	healthy	healthy donor	21	H5TNFBCXY161213	20079811	18093220	-2.1841050931479056	0.06673598114071222	176.0	-2.593638231603115	-0.5919159658928822
HD_39	HD_39	0	healthy	healthy donor	21	H5TNFBCXY161213	11293629	10117964	-1.6756241947086985	0.08858323452909556	172.0	-1.260308321527872	-0.5919159658928822
HD_40	HD_40	0	healthy	healthy donor	21	H5TNFBCXY161213	8205329	7358714	-1.544644652677014	0.08025141297240701	169.0	-0.8525115293113226	-0.5919159658928822
HD_41	HD_41	0	healthy	healthy donor	21	H5TNFBCXY161213	10753123	9656248	-1.9136716857745857	0.09813268918144669	170.0	-1.306524987228681	-0.5919159658928822
HD_42	HD_42	0	healthy	healthy donor	21	H5TNFBCXY161213	9224283	8300666	-1.709184740270596	0.06695626225138707	173.0	-1.5808968952604554	-0.5919159658928822
HD_45	HD_45	0	healthy	healthy donor	21	H5TNFBCXY161213	10218724	9169670	-1.5183565791553042	0.07174092022522682	169.0	-0.8804285536374967	-0.5919159658928822
HD_46	HD_46	0	healthy	healthy donor	21	H5TNFBCXY161213	11651875	10479319	-1.6218242312779578	0.06956704530392077	171.0	-1.2411403402177132	-0.5919159658928822
HD12	HD12	0	healthy	healthy donor	8	H2HMLADXY160130	2150211	1907658	-1.2984478062076594	0.0361938753619393	167.0	-0.5720251675675178	0.23413371689141446
HD2	HD2	0	healthy	healthy donor	17	H5KNFADXX151207	652783	567715	-1.7436222189093125	0.03893435797545486	180.0	-2.5577789382977087	0.18269018878033708
HD28	HD28	0	healthy	healthy donor	10	H2V35ADXY160309	2522151	2254806	-1.4807915016319073	0.08339215045681936	169.0	-0.7398641807289775	-0.1275511315253057
HD29	HD29	0	healthy	healthy donor	10	H2V35ADXY160309	1791470	1597074	-1.181655297674115	0.0767191477462772	168.0	-0.247745253788339	-0.1275511315253057
HD30	HD30	0	healthy	healthy donor	10	H2V35ADXY160309	2265432	2023780	-1.6255413606838247	0.060600860851738325	172.0	-1.4121073427435737	-0.1275511315253057