patient_id	label	class_label	sample_count	sample_ids	conditions	cancer_types	subtypes	batches	flowcells	input_records_total	canonical_autosome_usable_coordinate_records_total	canonical_autosome_usable_coordinate_records_median	global_short_long_log_ratio	coverage_logratio_mad	median_fragment_length	posthoc_advanced_disease_batch_confounded_primary_lodo_margin	posthoc_advanced_disease_batch_confounded_sample_weighted_grouped_margin_median	posthoc_advanced_disease_batch_only_lodo_margin	posthoc_advanced_disease_coordinate_record_depth_only_lodo_margin
01115_248	1	cancer	1	CRPC_248	prostate_cancer	prostate	Prostate	0	H2MHNADXX151023	1485206	1313466	1313466.0	-0.15991882073335079	0.08382311004997511	154.0	1.997946895526149	2.631615894009586	0.0680683857339669	0.5054606493521459
01115_264	1	cancer	1	CRPC_264_7	prostate_cancer	prostate	Prostate	18	H7LNNADXY160722	1663017	1477118	1477118.0	-0.7106742304014764	0.08543204049200614	159.0	0.9306829442650935	1.3034860936236292	0.19248335880377654	0.4197643832479524
01115_372	1	cancer	5	CRPC_372_4;CRPC_372_11;CRPC_372_12;CRPC_372_13;CRPC_372_8	prostate_cancer	prostate	Prostate	10;14;16;19;20	H2V35ADXY160309;H335TADXY160529;H3NHGADXY160629;H7LTVADXY160813;HVTHFBCXX160909	13728494	12158485	2129379.0	-0.5737043414261852	0.15902887936482024	163.0	1.209774331180201	1.6668392830261967	0.07461961152332458	0.1540402798601086
01115_463	1	cancer	1	CRPC_463.ctDNA	prostate_cancer	prostate	Prostate	4	H5KNFADXX151207	2096212	1833824	1833824.0	-1.2353399425975455	0.0632146306976944	166.0	-0.3379151695246575	-0.29113686166485203	0.09372801873155354	0.2626650560253033
01115_468	1	cancer	4	CRPC_468.ctDNA;CRPC_468.ctDNA_T2;CRPC_468_1;CRPC_468_2	prostate_cancer	prostate	Prostate	6;8;12	H2HMLADXY160130;H2W3CADXY160421;H5LFMADXX160116	8356371	7216688	1625440.5	-1.1694707841708079	0.08004576246847828	165.0	-0.06909790500536167	0.25171075947641575	0.15693154233540113	0.35021167628792177
01115_525	1	cancer	2	CRPC_525_6;CRPC_525_5	prostate_cancer	prostate	Prostate	15;18	H335TADXY160529;H7LNNADXY160722	3288267	2864022	1432011.0	-0.9877857046411457	0.1598203670978644	167.5	0.4097832902761212	0.6323034330730757	0.19324058011261913	0.4423524788181331
01115_531	1	cancer	2	CRPC_531;CRPC_531_1	prostate_cancer	prostate	Prostate	1;11	H5KNFADXX151207	5926757	5293928	2646964.0	-1.2723232519890526	0.05370948915115381	168.0	-0.6155483774959731	-0.6407786355512846	0.09756030606410565	-0.005490758119006747
01115_557	1	cancer	10	CRPC_1030_10;CRPC_1030_6;CRPC_1030_3;CRPC_1030_13;CRPC_1030;CRPC_1030_5;CRPC_1030_1;CRPC_1030_9;CRPC_1030_2;CRPC_1030_11	prostate_cancer	prostate	Prostate	1;2;6;12;14;18;19	H2W3CADXY160421;H335TADXY160529;H5KNFADXX151207;H5LFMADXX160116;H7LNNADXY160722;H7LTVADXY160813	26542042	23309643	2214700.5	-1.1354723760320704	0.07008741220331682	167.0	-0.2739497708357289	-0.26009719924438235	0.6403932833421148	0.1253895404284544
01115_606	1	cancer	1	CRPC_1035_1	prostate_cancer	prostate	Prostate	14	H335TADXY160529	2494585	2187987	2187987.0	-1.144501154482669	0.13867594293802998	167.0	0.16711514465278954	0.31790477134631645	0.1286008121090694	0.13424501265071098
01115_661	1	cancer	1	CRPC_1037_2	prostate_cancer	prostate	Prostate	20	HVTHFBCXX160909	982808	866058	866058.0	-1.1280704764602587	0.13021282710212745	168.0	0.043409361899136606	0.17964707106509858	0.13177232700082064	0.8160919727749237
09204_1054	1	cancer	2	MBC_1216_2;MBC_1216_1	breast_cancer	breast	HER2+	14;22	H2H7LADXY160205;H335TADXY160529	5597630	4916271	2458135.5	-0.8536154159292857	0.12114981407064285	162.0	0.7676108362966552	1.0721520151109685	0.12942772242814676	0.0490366946628103
09204_1056	1	cancer	1	MBC_1217_2	breast_cancer	breast	HER2+	12	H2W3CADXY160421	3425331	2992337	2992337.0	-0.6881335077651951	0.06420326260438713	160.0	0.7136346064963495	1.0666547006773663	0.18134166044614208	-0.09666745802132715
09204_1071	1	cancer	1	MBC_1226	breast_cancer	breast	HER2+	9	H2H7LADXY160205	1576469	1365698	1365698.0	-1.4768969965487964	0.042808878446559895	166.0	-0.7439742170158202	-0.8084507291638054	0.07465372493132366	0.4769453818282458
09204_189	1	cancer	1	MBC_1266	breast_cancer	breast	TNBC	19	H7LTVADXY160813	1785914	1497283	1497283.0	-0.5882557420123163	0.23280346577762767	162.0	1.7952105071061737	2.3353294692793978	0.12117311617410163	0.40989686693150934
09204_429	1	cancer	1	MBC_1296_3	breast_cancer	breast	TNBC	5	H5LH2ADXX151213	2066263	1781151	1781151.0	0.2832535392391655	0.2898945148069343	148.0	4.724634496078357	5.649983522166727	0.13511035064488358	0.28381603944694345
09204_557	1	cancer	1	MBC_1308_4	breast_cancer	breast	TNBC	5	H5LH2ADXX151213	2075469	1834350	1834350.0	-0.005231493501622539	0.2018513331435665	154.0	2.9660231607027963	3.7718350572456156	0.13511035064488358	0.26245689355283797
09204_622	1	cancer	1	MBC_1321	breast_cancer	breast	TNBC	20	HVTHFBCXX160909	2062611	1840951	1840951.0	-0.9632186703928763	0.19995178817022463	166.0	0.8244516202021961	1.1356172645943374	0.13177232700082062	0.25984958508768363
09204_732	1	cancer	1	MBC_1333_2	breast_cancer	breast	HER2+	9	H2H7LADXY160205	4180290	3683521	3683521.0	-1.244355307853471	0.08227506066466894	164.0	-0.04683572198259606	0.037445782291169516	0.07465372493132374	-0.2542766443326972
09204_826	1	cancer	1	MBC_1352_2	breast_cancer	breast	HER2+	13	H2LMNADXY160515	2317243	2029775	2029775.0	-0.8059139947842267	0.158352242359296	161.0	1.1414482203674157	1.529490716556119	0.09989022385704346	0.1889137252370893
09204_997	1	cancer	1	MBC_1401_1	breast_cancer	breast	HER2+	5	H5LH2ADXX151213	1159936	1007214	1007214.0	-1.6492808837269035	0.09623074930945119	170.0	-0.8935290684784425	-1.0246268403055767	0.13511035064488355	0.7018631927227397
12024_17	1	cancer	1	MBC_12024_17	breast_cancer	breast	TNBC	18	H7LNNADXY160722	2262006	1991740	1991740.0	-0.5550191731123187	0.18048578286737627	162.0	1.4571689802552406	1.9614974454264675	0.1924833588037767	0.2026686874480036
12431_24	1	cancer	1	MBC_1410_1	breast_cancer	breast	TNBC	8	H2HMLADXY160130	3482219	3071568	3071568.0	-0.22412966428463366	0.1987709988422104	157.0	2.3919553843361436	3.0962866509516425	-0.012703762384418012	-0.11625228891231908
12431_27	1	cancer	9	MBC_1413_2;MBC_1413_6;MBC_1413_3;MBC_1413_8;MBC_1413_4;MBC_1413_7;MBC_1413_5;MBC_1413_9;MBC_1413_1	breast_cancer	breast	TNBC	3;7	H5LFMADXX160116;H5LH2ADXX151213	27098906	23744129	2660891.0	-1.228294894220036	0.11233349064322518	166.0	0.003280852104612708	0.2198836271668477	0.04031774611875065	-0.00936984093834748
13449_44	1	cancer	1	CRPC_1431_1	prostate_cancer	prostate	Prostate	13	H2LMNADXY160515	2280226	2020651	2020651.0	-0.5971854104286575	0.12619382356094366	165.0	0.8010726172274079	1.190480451233264	0.09989022385704345	0.19219038544594502
14230_1	1	cancer	5	CRPC_1447_2;CRPC_1447_5;CRPC_1447_1;CRPC_1447;CRPC_1447_6	prostate_cancer	prostate	Prostate	0;4;5;12	H2MHNADXX151023;H2W3CADXY160421;H5KNFADXX151207;H5LH2ADXX151213	12194955	10836811	1879701.0	-0.926809513631288	0.1775798126474779	165.0	0.8012457165510022	1.0350181301225914	0.38080208750601846	0.2447276841645463
14230_14	1	cancer	5	CRPC_1451_6;CRPC_1451_9;CRPC_1451_11;CRPC_1451_10;CRPC_1451_4	prostate_cancer	prostate	Prostate	4;12;13;19;20	H2LMNADXY160515;H2W3CADXY160421;H5KNFADXX151207;H7LTVADXY160813;HVTHFBCXX160909	10867239	9555547	1813866.0	-0.9554407190581982	0.1612077715242073	165.0	0.6679155179717124	0.7581887805120426	0.5068641007229444	0.2706073870841397
14230_20	1	cancer	1	CRPC_1456_2	prostate_cancer	prostate	Prostate	12	H2W3CADXY160421	2443116	2142374	2142374.0	-1.0657442174325502	0.24195135744984064	165.0	1.1075291230410362	1.428030607921167	0.18134166044614208	0.14960658121777692
BCTC_28	1	cancer	1	CRPC_1472_1	prostate_cancer	prostate	Prostate	1	H5KNFADXX151207	2882397	2587044	2587044.0	-1.2803965232573533	0.10177891302691489	167.0	-0.20178300881102065	-0.14908908636672885	0.09670165487303231	0.011414181485596302
GC1609_972	1	cancer	1	CRPC_1487	prostate_cancer	prostate	Prostate	18	H7LNNADXY160722	1771617	1586203	1586203.0	-1.0539258657876875	0.1230543812293643	165.0	0.3293505572178017	0.5231644802297593	0.19248335880377668	0.3679582502434435
GC1609_985	1	cancer	1	CRPC_1488	prostate_cancer	prostate	Prostate	18	H7LNNADXY160722	1405815	1259344	1259344.0	-1.1536647080078035	0.16363961985223696	166.0	0.39873608164616436	0.5878580830921383	0.19248335880377668	0.5363058901355259
HD_38	0	noncancer	1	HD_38	healthy	none	healthy donor	21	H5TNFBCXY161213	20079811	18093220	18093220.0	-2.1841050931479056	0.06673598114071222	176.0	-2.1214000218590825	-2.593638231603115	-0.40848856700672015	-1.4287819249653222
HD_39	0	noncancer	1	HD_39	healthy	none	healthy donor	21	H5TNFBCXY161213	11293629	10117964	10117964.0	-1.6756241947086985	0.08858323452909556	172.0	-1.0772340060496024	-1.260308321527872	-0.40848856700672015	-0.9547909819212779
HD_40	0	noncancer	1	HD_40	healthy	none	healthy donor	21	H5TNFBCXY161213	8205329	7358714	7358714.0	-1.544644652677014	0.08025141297240701	169.0	-0.748801019460589	-0.8525115293113226	-0.40848856700672015	-0.7216800516649563
HD_41	0	noncancer	1	HD_41	healthy	none	healthy donor	21	H5TNFBCXY161213	10753123	9656248	9656248.0	-1.9136716857745857	0.09813268918144669	170.0	-1.0745150590104344	-1.306524987228681	-0.40848856700672015	-0.9197616094527306
HD_42	0	noncancer	1	HD_42	healthy	none	healthy donor	21	H5TNFBCXY161213	9224283	8300666	8300666.0	-1.709184740270596	0.06695626225138707	173.0	-1.3408181536530033	-1.5808968952604554	-0.40848856700672015	-0.8084322018710561
HD_45	0	noncancer	1	HD_45	healthy	none	healthy donor	21	H5TNFBCXY161213	10218724	9169670	9169670.0	-1.5183565791553042	0.07174092022522682	169.0	-0.7768704544468022	-0.8804285536374967	-0.40848856700672015	-0.8813656775634617
HD_46	0	noncancer	1	HD_46	healthy	none	healthy donor	21	H5TNFBCXY161213	11651875	10479319	10479319.0	-1.6218242312779578	0.06956704530392077	171.0	-1.0646201552339651	-1.2411403402177132	-0.40848856700672015	-0.981339297674567
HD12	0	noncancer	1	HD12	healthy	none	healthy donor	8	H2HMLADXY160130	2150211	1907658	1907658.0	-1.2984478062076594	0.0361938753619393	167.0	-0.5808328020739975	-0.5720251675675178	0.11697909320378624	0.2605541407565532
HD2	0	noncancer	1	HD2	healthy	none	healthy donor	17	H5KNFADXX151207	652783	567715	567715.0	-1.7436222189093125	0.03893435797545486	180.0	-2.2248268032486638	-2.5577789382977087	0.056252054635588286	1.5490691662276492
HD28	0	noncancer	1	HD28	healthy	none	healthy donor	10	H2V35ADXY160309	2522151	2254806	2254806.0	-1.4807915016319073	0.08339215045681936	169.0	-0.66614079540878	-0.7398641807289775	-0.09899671565075019	0.12757749629354395
HD29	0	noncancer	1	HD29	healthy	none	healthy donor	10	H2V35ADXY160309	1791470	1597074	1597074.0	-1.181655297674115	0.0767191477462772	168.0	-0.3160717659511324	-0.247745253788339	-0.09899671565075019	0.4097232099404644
HD30	0	noncancer	1	HD30	healthy	none	healthy donor	10	H2V35ADXY160309	2265432	2023780	2023780.0	-1.6255413606838247	0.060600860851738325	172.0	-1.2111696772230485	-1.4121073427435737	-0.09899671565075019	0.21281883504867716