sample_id	donor_id	matched_pair_id	label	control_type	cancer_type	stage	age	sex	site_id	batch_id	input_path	format	reference_build	coordinate_system	dedup_state	permitted_use	feature_path	input_records	usable_fragments	covered_bins	covered_bin_fraction	median_fragment_length	fragment_length_mad	short_100_150	long_151_220	global_short_long_log_ratio	coverage_logratio_mad	coverage_logratio_p90_p10	motif_observed_fragments
MAL0646	MAL0646	CRAG-LIVER-01	1	cancer	liver	1a	66	Female	UC_Biorepository	Cabat5	real_data/raw/crag/liver/MAL0646.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0646.features.json	36910198	32552989	567	0.9626485568760611	168.0	10.0	5141498	26765269	-1.6497605589713598	0.04777581032380951	0.2409810158297418	0
MAL0646m	MAL0646m	CRAG-LIVER-01	0	matched_noncancer	none	NA	66	Female	UC_Biorepository	Cabat5	real_data/raw/crag/liver/MAL0646m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0646m.features.json	29261862	25970437	567	0.9626485568760611	167.0	11.0	4972058	20294729	-1.4065272823278003	0.043657400718474015	0.2522907434681187	0
MAL0714	MAL0714	CRAG-LIVER-02	1	cancer	liver	2	62	Male	UC_Biorepository	Cabat3	real_data/raw/crag/liver/MAL0714.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0714.features.json	26669972	23984297	567	0.9626485568760611	167.0	12.0	4638718	18759082	-1.397239892385473	0.03890399713773984	0.22972545478562426	0
MAL0714m	MAL0714m	CRAG-LIVER-02	0	matched_noncancer	none	NA	62	Male	UC_Biorepository	Cabat3	real_data/raw/crag/liver/MAL0714m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0714m.features.json	32179798	29079901	567	0.9626485568760611	171.0	11.0	3342794	24885039	-2.007459665794325	0.02413206571310944	0.24996624023717723	0
MAL0944	MAL0944	CRAG-LIVER-03	1	cancer	liver	2	64	Male	UC_Biorepository	Cabat3	real_data/raw/crag/liver/MAL0944.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0944.features.json	22324593	20163277	567	0.9626485568760611	171.0	12.0	2911860	16342291	-1.7249640943102555	0.03759047806895399	0.22089123074430306	0
MAL0944m	MAL0944m	CRAG-LIVER-03	0	matched_noncancer	none	NA	64	Male	UC_Biorepository	Cabat3	real_data/raw/crag/liver/MAL0944m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0944m.features.json	33228107	30024262	567	0.9626485568760611	171.0	12.0	4030658	24703573	-1.8130181471686435	0.02603041829290298	0.23513131529493625	0
MAL0945	MAL0945	CRAG-LIVER-04	1	cancer	liver	1a	56	Female	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL0945.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0945.features.json	13291910	11719141	567	0.9626485568760611	167.0	11.0	2208800	9295629	-1.4370947354622703	0.06641463012372828	0.2784017181863725	0
MAL0945m	MAL0945m	CRAG-LIVER-04	0	matched_noncancer	none	NA	56	Female	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL0945m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL0945m.features.json	22085700	19541116	567	0.9626485568760611	169.0	12.0	3216499	15690492	-1.5847612992518794	0.028030682018670205	0.23168552078049254	0
MAL1205	MAL1205	CRAG-LIVER-05	1	cancer	liver	1b	77	Male	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL1205.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1205.features.json	26647942	24035655	567	0.9626485568760611	167.0	12.0	4549635	18842161	-1.4210498720028968	0.05443014049076833	0.24685538067946045	0
MAL1205m	MAL1205m	CRAG-LIVER-05	0	matched_noncancer	none	NA	77	Male	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL1205m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1205m.features.json	14835909	13342574	567	0.9626485568760611	168.0	12.0	2389587	10529074	-1.4830196736402104	0.03385875737057731	0.22844118823696177	0
MAL1237	MAL1237	CRAG-LIVER-06	1	cancer	liver	2	59	Male	UC_Biorepository	Cabat2	real_data/raw/crag/liver/MAL1237.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1237.features.json	32736469	29471448	567	0.9626485568760611	166.0	10.0	5573525	23432604	-1.436100609187504	0.05561320921293067	0.2574689872424477	0
MAL1237m	MAL1237m	CRAG-LIVER-06	0	matched_noncancer	none	NA	59	Male	UC_Biorepository	Cabat2	real_data/raw/crag/liver/MAL1237m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1237m.features.json	28425454	25650564	567	0.9626485568760611	166.0	11.0	5190486	19925806	-1.3451882699027902	0.03453413106931613	0.2425929743003621	0
MAL1246	MAL1246	CRAG-LIVER-07	1	cancer	liver	1b	78	Male	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL1246.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1246.features.json	49966095	45155355	567	0.9626485568760611	167.0	11.0	8525269	35553678	-1.4280089893033672	0.07312422205552505	0.30501019172234817	0
MAL1246m	MAL1246m	CRAG-LIVER-07	0	matched_noncancer	none	NA	78	Male	UC_Biorepository	Cabat1	real_data/raw/crag/liver/MAL1246m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1246m.features.json	13274252	11951181	567	0.9626485568760611	168.0	11.0	2098046	9559219	-1.516499407776815	0.03243003089246166	0.22814434362225117	0
MAL1323	MAL1323	CRAG-LIVER-08	1	cancer	liver	1b	25	Female	UC_Biorepository	Cabat2	real_data/raw/crag/liver/MAL1323.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1323.features.json	13797405	12179453	567	0.9626485568760611	168.0	10.0	1716134	10298352	-1.7919095530380786	0.05029527083722041	0.23498975706574238	0
MAL1323m	MAL1323m	CRAG-LIVER-08	0	matched_noncancer	none	NA	25	Female	UC_Biorepository	Cabat2	real_data/raw/crag/liver/MAL1323m.hg19.frag.bed.gz	CRAG_BED8_GZIP	hg19	zero_based_half_open	author_pipeline_removed_PCR_duplicates	CC_BY_4.0_research	real_data/derived/crag_liver/features/MAL1323m.features.json	39178820	34640659	567	0.9626485568760611	169.0	13.0	5798999	27046293	-1.539864569201728	0.028544387130437165	0.2322832795899032	0